HL_6ORD_063

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

6ORD|1|RA|C|888

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_063 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.3082

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

6ORD|1|RA|C|884
6ORD|1|RA|C|885
6ORD|1|RA|C|886
6ORD|1|RA|A|887
6ORD|1|RA|C|888
6ORD|1|RA|C|889
6ORD|1|RA|A|890
6ORD|1|RA|G|892

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13