HL_6ORD_072

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6ORD|1|RA|U|1396, 6ORD|1|RA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_072 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.0755

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6ORD|1|RA|G|1389
6ORD|1|RA|U|1390
6ORD|1|RA|U|1391
6ORD|1|RA|A|1392
6ORD|1|RA|A|1393
6ORD|1|RA|U|1394
6ORD|1|RA|A|1395
6ORD|1|RA|U|1396
6ORD|1|RA|U|1397
6ORD|1|RA|C|1398

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23