HL_6ORD_119

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6ORD|1|XA|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_119 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.0948

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6ORD|1|XA|C|419
6ORD|1|XA|U|420
6ORD|1|XA|U|421
6ORD|1|XA|C|422
6ORD|1|XA|G|423
6ORD|1|XA|G|424

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XC

30S ribosomal protein S3

Chain XD

30S ribosomal protein S4