HL_6ORD_213

3D structure

PDB id

6ORD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCAGC

Length

5 nucleotides

Bulged bases

6ORD|1|YA|A|2801|||B

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORD_213 not in the Motif Atlas

Geometric match to HL_4V9F_011

Geometric discrepancy: 0.2651

The information below is about HL_4V9F_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6ORD|1|YA|G|2793
6ORD|1|YA|C|2794|||A
6ORD|1|YA|A|2801|||B
6ORD|1|YA|G|2802
6ORD|1|YA|C|2803

Current chains

Chain YA

23S rRNA

Nearby chains