HL_6ORE_028

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

6ORE|1|1|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORE_028 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3938

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

6ORE|1|1|G|1063
6ORE|1|1|C|1064
6ORE|1|1|U|1065
6ORE|1|1|U|1066
6ORE|1|1|A|1067
6ORE|1|1|G|1068
6ORE|1|1|A|1069
6ORE|1|1|A|1070
6ORE|1|1|G|1071
6ORE|1|1|C|1072
6ORE|1|1|A|1073
6ORE|1|1|G|1074
6ORE|1|1|C|1075

Current chains

Chain 1

23S ribosomal RNA

Nearby chains