HL_6ORL_103
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- G(4OC)UGAAAAC
- Length
- 9 nucleotides
- Bulged bases
- 6ORL|1|5|U|33
- QA status
- Modified nucleotides: 4OC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ORL_103 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1454
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6ORL|1|5|G|31
6ORL|1|5|4OC|32
6ORL|1|5|U|33
6ORL|1|5|G|34
6ORL|1|5|A|35
6ORL|1|5|A|36
6ORL|1|5|A|37
6ORL|1|5|A|38
6ORL|1|5|C|39
Current chains
- Chain 5
- P-tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain A
- Peptide chain release factor 1
- Chain n
- 30S ribosomal protein S9
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