HL_6ORL_114
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 6ORL|1|3|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ORL_114 not in the Motif Atlas
- Homologous match to HL_5J7L_215
- Geometric discrepancy: 0.1582
- The information below is about HL_5J7L_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97756.2
- Basepair signature
- cWW-cSH-cWS-F-tSW-cSW-F-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6ORL|1|3|A|34
6ORL|1|3|C|35
6ORL|1|3|C|36
6ORL|1|3|C|37
6ORL|1|3|C|38
6ORL|1|3|A|39
6ORL|1|3|U|40
6ORL|1|3|G|41
6ORL|1|3|C|42
6ORL|1|3|C|43
6ORL|1|3|G|44
6ORL|1|3|A|45
6ORL|1|3|A|46
6ORL|1|3|C|47
6ORL|1|3|U|48
Current chains
- Chain 3
- 5S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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