HL_6OSI_008

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_008 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.1779

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6OSI|1|QA|C|320
6OSI|1|QA|A|321
6OSI|1|QA|C|322
6OSI|1|QA|U|323
6OSI|1|QA|G|324
6OSI|1|QA|A|325
6OSI|1|QA|G|326
6OSI|1|QA|A|327
6OSI|1|QA|C|328
6OSI|1|QA|A|329
6OSI|1|QA|C|330
6OSI|1|QA|G|331
6OSI|1|QA|G|332
6OSI|1|QA|G|333

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20