HL_6OSI_021

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGAAGCAACGCG

Length

12 nucleotides

Bulged bases

6OSI|1|QA|G|966, 6OSI|1|QA|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_021 not in the Motif Atlas

Geometric match to HL_4V9F_003

Geometric discrepancy: 0.1406

The information below is about HL_4V9F_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

6OSI|1|QA|C|962
6OSI|1|QA|G|963
6OSI|1|QA|A|964
6OSI|1|QA|A|965
6OSI|1|QA|G|966
6OSI|1|QA|C|967
6OSI|1|QA|A|968
6OSI|1|QA|A|969
6OSI|1|QA|C|970
6OSI|1|QA|G|971
6OSI|1|QA|C|972
6OSI|1|QA|G|973

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QJ

30S ribosomal protein S10

Chain QM

30S ribosomal protein S13

Chain QN

30S ribosomal protein S14 type Z