HL_6OSI_034

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

UCGA

Length

4 nucleotides

Bulged bases

6OSI|1|QV|G|31

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_034 not in the Motif Atlas

Geometric match to HL_5ID6_001

Geometric discrepancy: 0.1389

The information below is about HL_5ID6_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

6OSI|1|QV|U|29
6OSI|1|QV|C|30
6OSI|1|QV|G|31
6OSI|1|QV|A|41

Current chains

Chain QV

tRNA(Pro)

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QM

30S ribosomal protein S13