HL_6OSI_061

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_061 not in the Motif Atlas

Homologous match to HL_9DFE_024

Geometric discrepancy: 0.3821

The information below is about HL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OSI|1|RA|C|884
6OSI|1|RA|C|885
6OSI|1|RA|C|886
6OSI|1|RA|A|887
6OSI|1|RA|C|888
6OSI|1|RA|C|889
6OSI|1|RA|A|890
6OSI|1|RA|G|892

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QS

30S ribosomal protein S19

Chain RG

50S ribosomal protein L5