HL_6OSI_071

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6OSI|1|RA|U|1396, 6OSI|1|RA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_071 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1286

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6OSI|1|RA|G|1389
6OSI|1|RA|U|1390
6OSI|1|RA|U|1391
6OSI|1|RA|A|1392
6OSI|1|RA|A|1393
6OSI|1|RA|U|1394
6OSI|1|RA|A|1395
6OSI|1|RA|U|1396
6OSI|1|RA|U|1397
6OSI|1|RA|C|1398

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RX

50S ribosomal protein L23