HL_6OSI_072

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CAUGGACG

Length

8 nucleotides

Bulged bases

6OSI|1|RA|U|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_072 not in the Motif Atlas

Geometric match to HL_7RQB_037

Geometric discrepancy: 0.1887

The information below is about HL_7RQB_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32426.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

6OSI|1|RA|C|1451
6OSI|1|RA|A|1453
6OSI|1|RA|U|1454
6OSI|1|RA|G|1455
6OSI|1|RA|G|1456
6OSI|1|RA|A|1457
6OSI|1|RA|C|1458
6OSI|1|RA|G|1459

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17