HL_6OSI_087

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_087 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.2477

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6OSI|1|RA|C|2143
6OSI|1|RA|U|2144
6OSI|1|RA|C|2145
6OSI|1|RA|C|2146
6OSI|1|RA|G|2147
6OSI|1|RA|G|2148

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QK

30S ribosomal protein S11