HL_6OSI_111

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CCUUGG

Length

6 nucleotides

Bulged bases

6OSI|1|XA|U|186|||J, 6OSI|1|XA|G|186|||K

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_111 not in the Motif Atlas

Homologous match to HL_4LFB_004

Geometric discrepancy: 0.2636

The information below is about HL_4LFB_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.6

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

6OSI|1|XA|C|186|||G
6OSI|1|XA|C|186|||H
6OSI|1|XA|U|186|||I
6OSI|1|XA|U|186|||J
6OSI|1|XA|G|186|||K
6OSI|1|XA|G|186|||L

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17