HL_6OSI_129

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GUGAAAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_129 not in the Motif Atlas

Homologous match to HL_6CZR_093

Geometric discrepancy: 0.2702

The information below is about HL_6CZR_093

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSI|1|XA|G|1011
6OSI|1|XA|U|1012
6OSI|1|XA|G|1013
6OSI|1|XA|A|1014
6OSI|1|XA|A|1015
6OSI|1|XA|A|1016
6OSI|1|XA|G|1017
6OSI|1|XA|C|1018

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XN

30S ribosomal protein S14 type Z

Chain XS

30S ribosomal protein S19