HL_6OSI_202

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

6OSI|1|YA|U|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_202 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.1755

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

6OSI|1|YA|C|2404
6OSI|1|YA|G|2405
6OSI|1|YA|U|2406
6OSI|1|YA|G|2407
6OSI|1|YA|U|2408
6OSI|1|YA|G|2409
6OSI|1|YA|G|2410
6OSI|1|YA|A|2411
6OSI|1|YA|A|2412
6OSI|1|YA|G|2413

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L28

Chain YP

50S ribosomal protein L15