HL_6OSI_210

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGUCAAG

Length

7 nucleotides

Bulged bases

6OSI|1|YA|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_210 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.36

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6OSI|1|YA|C|2794
6OSI|1|YA|G|2795
6OSI|1|YA|U|2797
6OSI|1|YA|C|2798
6OSI|1|YA|A|2799
6OSI|1|YA|A|2801
6OSI|1|YA|G|2802

Current chains

Chain YA

23S rRNA

Nearby chains