HL_6OSK_026

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

G(PSU)GCUAACGU

Length

10 nucleotides

Bulged bases

6OSK|1|1|U|958, 6OSK|1|1|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSK_026 not in the Motif Atlas

Homologous match to HL_5J7L_159

Geometric discrepancy: 0.119

The information below is about HL_5J7L_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSK|1|1|G|954
6OSK|1|1|PSU|955
6OSK|1|1|G|956
6OSK|1|1|C|957
6OSK|1|1|U|958
6OSK|1|1|A|959
6OSK|1|1|A|960
6OSK|1|1|C|961
6OSK|1|1|G|962
6OSK|1|1|U|963

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16