HL_6OSK_034

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6OSK|1|1|A|1392, 6OSK|1|1|U|1396, 6OSK|1|1|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSK_034 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.1553

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OSK|1|1|G|1389
6OSK|1|1|U|1390
6OSK|1|1|U|1391
6OSK|1|1|A|1392
6OSK|1|1|A|1393
6OSK|1|1|U|1394
6OSK|1|1|A|1395
6OSK|1|1|U|1396
6OSK|1|1|U|1397
6OSK|1|1|C|1398

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23