3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSK_057 not in the Motif Atlas
Homologous match to HL_7A0S_057
Geometric discrepancy: 0.0959
The information below is about HL_7A0S_057
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

6OSK|1|1|C|2374
6OSK|1|1|G|2375
6OSK|1|1|A|2376
6OSK|1|1|A|2377
6OSK|1|1|A|2378
6OSK|1|1|G|2379

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain O
50S ribosomal protein L18
Chain c
50S ribosomal protein L33

Coloring options:


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