HL_6OSK_110

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUU

Length

75 nucleotides

Bulged bases

6OSK|1|1|G|2112, 6OSK|1|1|G|2115, 6OSK|1|1|G|2125, 6OSK|1|1|U|2131, 6OSK|1|1|U|2132, 6OSK|1|1|U|2139, 6OSK|1|1|C|2146, 6OSK|1|1|A|2158, 6OSK|1|1|A|2163, 6OSK|1|1|C|2164, 6OSK|1|1|G|2168, 6OSK|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSK|1|1|A|2108
6OSK|1|1|U|2109
6OSK|1|1|G|2110
6OSK|1|1|U|2111
6OSK|1|1|G|2112
6OSK|1|1|U|2113
6OSK|1|1|A|2114
6OSK|1|1|G|2115
6OSK|1|1|G|2116
6OSK|1|1|A|2117
6OSK|1|1|U|2118
6OSK|1|1|A|2119
6OSK|1|1|G|2120
6OSK|1|1|G|2121
6OSK|1|1|U|2122
6OSK|1|1|G|2123
6OSK|1|1|G|2124
6OSK|1|1|G|2125
6OSK|1|1|A|2126
6OSK|1|1|G|2127
6OSK|1|1|G|2128
6OSK|1|1|C|2129
6OSK|1|1|U|2130
6OSK|1|1|U|2131
6OSK|1|1|U|2132
6OSK|1|1|G|2133
6OSK|1|1|A|2134
6OSK|1|1|A|2135
6OSK|1|1|G|2136
6OSK|1|1|U|2137
6OSK|1|1|G|2138
6OSK|1|1|U|2139
6OSK|1|1|G|2140
6OSK|1|1|G|2141
6OSK|1|1|A|2142
6OSK|1|1|C|2143
6OSK|1|1|G|2144
6OSK|1|1|C|2145
6OSK|1|1|C|2146
6OSK|1|1|A|2147
6OSK|1|1|G|2148
6OSK|1|1|U|2149
6OSK|1|1|C|2150
6OSK|1|1|U|2151
6OSK|1|1|G|2152
6OSK|1|1|C|2153
6OSK|1|1|A|2154
6OSK|1|1|U|2155
6OSK|1|1|G|2156
6OSK|1|1|G|2157
6OSK|1|1|A|2158
6OSK|1|1|G|2159
6OSK|1|1|C|2160
6OSK|1|1|C|2161
6OSK|1|1|G|2162
6OSK|1|1|A|2163
6OSK|1|1|C|2164
6OSK|1|1|C|2165
6OSK|1|1|U|2166
6OSK|1|1|U|2167
6OSK|1|1|G|2168
6OSK|1|1|A|2169
6OSK|1|1|A|2170
6OSK|1|1|A|2171
6OSK|1|1|U|2172
6OSK|1|1|A|2173
6OSK|1|1|C|2174
6OSK|1|1|C|2175
6OSK|1|1|A|2176
6OSK|1|1|C|2177
6OSK|1|1|C|2178
6OSK|1|1|C|2179
6OSK|1|1|U|2180
6OSK|1|1|U|2181
6OSK|1|1|U|2182

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S11