HL_6OSQ_104
3D structure
- PDB id
- 6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 accommodated state bound Release complex 70S at long incubation time point
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- G(4OC)UGAAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4OC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OSQ_104 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.161
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
6OSQ|1|5|G|31
6OSQ|1|5|4OC|32
6OSQ|1|5|U|33
6OSQ|1|5|G|34
6OSQ|1|5|A|35
6OSQ|1|5|A|36
6OSQ|1|5|A|37
6OSQ|1|5|A|38
6OSQ|1|5|C|39
Current chains
- Chain 5
- P-tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain A
- Peptide chain release factor 1
- Chain n
- 30S ribosomal protein S9
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