3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GAAACAAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OT3_027 not in the Motif Atlas
Homologous match to HL_4WF9_028
Geometric discrepancy: 0.1537
The information below is about HL_4WF9_028
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_42998.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

6OT3|1|1|G|978
6OT3|1|1|A|979
6OT3|1|1|A|980
6OT3|1|1|A|981
6OT3|1|1|C|982
6OT3|1|1|A|983
6OT3|1|1|A|984
6OT3|1|1|C|985

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain Q
50S ribosomal protein L20
Chain R
50S ribosomal protein L21
Chain Z
50S ribosomal protein L30

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