HL_6OTR_051
3D structure
- PDB id
- 6OTR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.12 Å
Loop
- Sequence
- GGACCACC
- Length
- 8 nucleotides
- Bulged bases
- 6OTR|1|RA|G|411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OTR_051 not in the Motif Atlas
- Homologous match to HL_7RQB_014
- Geometric discrepancy: 0.0865
- The information below is about HL_7RQB_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
6OTR|1|RA|G|410
6OTR|1|RA|G|411
6OTR|1|RA|A|412
6OTR|1|RA|C|413
6OTR|1|RA|C|414
6OTR|1|RA|A|415
6OTR|1|RA|C|416
6OTR|1|RA|C|417
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RP
- 50S ribosomal protein L15
Coloring options: