HL_6OXA_173

3D structure

PDB id

6OXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OXA|1|YA|C|884
6OXA|1|YA|C|885
6OXA|1|YA|C|886
6OXA|1|YA|A|887
6OXA|1|YA|C|888
6OXA|1|YA|C|889
6OXA|1|YA|A|890
6OXA|1|YA|G|892

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13

Chain XZ

Addiction module toxin, Txe/YoeB family