HL_6P4G_023

3D structure

PDB id

6P4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6P4G|1|2|U|885
6P4G|1|2|A|886
6P4G|1|2|U|887
6P4G|1|2|U|888
6P4G|1|2|U|889
6P4G|1|2|U|890
6P4G|1|2|G|891
6P4G|1|2|U|892
6P4G|1|2|U|893
6P4G|1|2|G|894
6P4G|1|2|G|895
6P4G|1|2|U|896
6P4G|1|2|U|897
6P4G|1|2|U|898
6P4G|1|2|U|899
6P4G|1|2|C|900
6P4G|1|2|G|901

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS6

Chain M

uS17