HL_6P4H_005

3D structure

PDB id

6P4H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUAUGGUAACACAUGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6P4H|1|1|G|6580
6P4H|1|1|U|6581
6P4H|1|1|A|6582
6P4H|1|1|U|6583
6P4H|1|1|G|6584
6P4H|1|1|G|6585
6P4H|1|1|U|6586
6P4H|1|1|A|6587
6P4H|1|1|A|6588
6P4H|1|1|C|6589
6P4H|1|1|A|6590
6P4H|1|1|C|6591
6P4H|1|1|A|6592
6P4H|1|1|U|6593
6P4H|1|1|G|6594
6P4H|1|1|C|6595

Current chains

Chain 1

IAPV-IRES

Nearby chains