HL_6P5N_024

3D structure

PDB id

6P5N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6P5N|1|2|C|884
6P5N|1|2|U|885
6P5N|1|2|A|886
6P5N|1|2|U|887
6P5N|1|2|U|888
6P5N|1|2|U|889
6P5N|1|2|U|890
6P5N|1|2|G|891
6P5N|1|2|U|892
6P5N|1|2|U|893
6P5N|1|2|G|894
6P5N|1|2|G|895
6P5N|1|2|U|896
6P5N|1|2|U|897
6P5N|1|2|U|898
6P5N|1|2|U|899
6P5N|1|2|C|900
6P5N|1|2|G|901
6P5N|1|2|G|902

Current chains

Chain 2

18S rRNA

Nearby chains

Chain H

eS6

Chain M

uS17