HL_6PC5_025

3D structure

PDB id

6PC5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 46 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGGGUCACUUACC

Length

14 nucleotides

Bulged bases

6PC5|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC5|1|I|G|879
6PC5|1|I|G|880
6PC5|1|I|G|881
6PC5|1|I|G|882
6PC5|1|I|G|883
6PC5|1|I|U|884
6PC5|1|I|C|885
6PC5|1|I|A|892
6PC5|1|I|C|893
6PC5|1|I|U|894
6PC5|1|I|U|895
6PC5|1|I|A|896
6PC5|1|I|C|897
6PC5|1|I|C|898

Current chains

Chain I

23S ribosomal RNA

Nearby chains