HL_6PC5_028

3D structure

PDB id

6PC5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compounds 46 and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUGUUGGCUUAGAAGCAGCCAUCAUU

Length

26 nucleotides

Bulged bases

6PC5|1|I|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC5|1|I|A|1057
6PC5|1|I|U|1058
6PC5|1|I|G|1059
6PC5|1|I|U|1060
6PC5|1|I|U|1061
6PC5|1|I|G|1062
6PC5|1|I|G|1063
6PC5|1|I|C|1064
6PC5|1|I|U|1065
6PC5|1|I|U|1066
6PC5|1|I|A|1067
6PC5|1|I|G|1068
6PC5|1|I|A|1069
6PC5|1|I|A|1070
6PC5|1|I|G|1071
6PC5|1|I|C|1072
6PC5|1|I|A|1073
6PC5|1|I|G|1074
6PC5|1|I|C|1075
6PC5|1|I|C|1076
6PC5|1|I|A|1077
6PC5|1|I|U|1078
6PC5|1|I|C|1079
6PC5|1|I|A|1080
6PC5|1|I|U|1081
6PC5|1|I|U|1082

Current chains

Chain I

23S ribosomal RNA

Nearby chains