HL_6PC6_072

3D structure

PDB id

6PC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 47

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

50 nucleotides

Bulged bases

6PC6|1|I|U|1078, 6PC6|1|I|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PC6|1|I|G|1055
6PC6|1|I|G|1056
6PC6|1|I|A|1057
6PC6|1|I|U|1058
6PC6|1|I|G|1059
6PC6|1|I|U|1060
6PC6|1|I|U|1061
6PC6|1|I|G|1062
6PC6|1|I|G|1063
6PC6|1|I|C|1064
6PC6|1|I|U|1065
6PC6|1|I|U|1066
6PC6|1|I|A|1067
6PC6|1|I|G|1068
6PC6|1|I|A|1069
6PC6|1|I|A|1070
6PC6|1|I|G|1071
6PC6|1|I|C|1072
6PC6|1|I|A|1073
6PC6|1|I|G|1074
6PC6|1|I|C|1075
6PC6|1|I|C|1076
6PC6|1|I|A|1077
6PC6|1|I|U|1078
6PC6|1|I|C|1079
6PC6|1|I|A|1080
6PC6|1|I|U|1081
6PC6|1|I|U|1082
6PC6|1|I|U|1083
6PC6|1|I|A|1084
6PC6|1|I|A|1085
6PC6|1|I|A|1086
6PC6|1|I|G|1087
6PC6|1|I|A|1088
6PC6|1|I|A|1089
6PC6|1|I|A|1090
6PC6|1|I|G|1091
6PC6|1|I|C|1092
6PC6|1|I|G|1093
6PC6|1|I|U|1094
6PC6|1|I|A|1095
6PC6|1|I|A|1096
6PC6|1|I|U|1097
6PC6|1|I|A|1098
6PC6|1|I|G|1099
6PC6|1|I|C|1100
6PC6|1|I|U|1101
6PC6|1|I|C|1102
6PC6|1|I|A|1103
6PC6|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains