3D structure

PDB id
6PC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 50S ribosome bound to compound 46
Experimental method
ELECTRON MICROSCOPY
Resolution
2.5 Å

Loop

Sequence
GACCCCAUGCCGAACUC
Length
17 nucleotides
Bulged bases
6PC7|1|J|C|35, 6PC7|1|J|C|36, 6PC7|1|J|G|41
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6PC7|1|J|G|33
6PC7|1|J|A|34
6PC7|1|J|C|35
6PC7|1|J|C|36
6PC7|1|J|C|37
6PC7|1|J|C|38
6PC7|1|J|A|39
6PC7|1|J|U|40
6PC7|1|J|G|41
6PC7|1|J|C|42
6PC7|1|J|C|43
6PC7|1|J|G|44
6PC7|1|J|A|45
6PC7|1|J|A|46
6PC7|1|J|C|47
6PC7|1|J|U|48
6PC7|1|J|C|49

Current chains

Chain J
5S ribosomal RNA

Nearby chains

Chain I
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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