HL_6PCH_048

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CG(PSU)AAC(3TD)A(PSU)AACG

Length

13 nucleotides

Bulged bases

6PCH|1|I|A|1912, 6PCH|1|I|A|1913, 6PCH|1|I|C|1914, 6PCH|1|I|A|1916

QA status

Modified nucleotides: PSU, 3TD

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCH|1|I|C|1909
6PCH|1|I|G|1910
6PCH|1|I|PSU|1911
6PCH|1|I|A|1912
6PCH|1|I|A|1913
6PCH|1|I|C|1914
6PCH|1|I|3TD|1915
6PCH|1|I|A|1916
6PCH|1|I|PSU|1917
6PCH|1|I|A|1918
6PCH|1|I|A|1919
6PCH|1|I|C|1920
6PCH|1|I|G|1921

Current chains

Chain I

23S ribosomal RNA

Nearby chains