HL_6PCQ_025

3D structure

PDB id

6PCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to VM2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGGGGUCACUUACC

Length

14 nucleotides

Bulged bases

6PCQ|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCQ|1|I|G|879
6PCQ|1|I|G|880
6PCQ|1|I|G|881
6PCQ|1|I|G|882
6PCQ|1|I|G|883
6PCQ|1|I|U|884
6PCQ|1|I|C|885
6PCQ|1|I|A|892
6PCQ|1|I|C|893
6PCQ|1|I|U|894
6PCQ|1|I|U|895
6PCQ|1|I|A|896
6PCQ|1|I|C|897
6PCQ|1|I|C|898

Current chains

Chain I

23S ribosomal RNA

Nearby chains