HL_6PCR_028

3D structure

PDB id

6PCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 40o

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

49 nucleotides

Bulged bases

6PCR|1|I|U|1078, 6PCR|1|I|A|1084, 6PCR|1|I|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCR|1|I|G|1056
6PCR|1|I|A|1057
6PCR|1|I|U|1058
6PCR|1|I|G|1059
6PCR|1|I|U|1060
6PCR|1|I|U|1061
6PCR|1|I|G|1062
6PCR|1|I|G|1063
6PCR|1|I|C|1064
6PCR|1|I|U|1065
6PCR|1|I|U|1066
6PCR|1|I|A|1067
6PCR|1|I|G|1068
6PCR|1|I|A|1069
6PCR|1|I|A|1070
6PCR|1|I|G|1071
6PCR|1|I|C|1072
6PCR|1|I|A|1073
6PCR|1|I|G|1074
6PCR|1|I|C|1075
6PCR|1|I|C|1076
6PCR|1|I|A|1077
6PCR|1|I|U|1078
6PCR|1|I|C|1079
6PCR|1|I|A|1080
6PCR|1|I|U|1081
6PCR|1|I|U|1082
6PCR|1|I|U|1083
6PCR|1|I|A|1084
6PCR|1|I|A|1085
6PCR|1|I|A|1086
6PCR|1|I|G|1087
6PCR|1|I|A|1088
6PCR|1|I|A|1089
6PCR|1|I|A|1090
6PCR|1|I|G|1091
6PCR|1|I|C|1092
6PCR|1|I|G|1093
6PCR|1|I|U|1094
6PCR|1|I|A|1095
6PCR|1|I|A|1096
6PCR|1|I|U|1097
6PCR|1|I|A|1098
6PCR|1|I|G|1099
6PCR|1|I|C|1100
6PCR|1|I|U|1101
6PCR|1|I|C|1102
6PCR|1|I|A|1103
6PCR|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains