Loop HL_6PCR

3D structure

PDB id: 6PCR (explore in PDB, NAKB, or RNA 3D Hub)
Description: E. coli 50S ribosome bound to compound 40o
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.5 Å

Loop

Sequence: GUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC
Length: 57 nucleotides
Bulged bases: 6PCR|1|I|U|2122, 6PCR|1|I|G|2125, 6PCR|1|I|U|2131, 6PCR|1|I|U|2132, 6PCR|1|I|G|2133, 6PCR|1|I|A|2135, 6PCR|1|I|G|2140, 6PCR|1|I|C|2145, 6PCR|1|I|C|2160, 6PCR|1|I|A|2163, 6PCR|1|I|A|2173, 6PCR|1|I|C|2174
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6PCR|1|I|G|2121
6PCR|1|I|U|2122
6PCR|1|I|G|2123
6PCR|1|I|G|2124
6PCR|1|I|G|2125
6PCR|1|I|A|2126
6PCR|1|I|G|2127
6PCR|1|I|G|2128
6PCR|1|I|C|2129
6PCR|1|I|U|2130
6PCR|1|I|U|2131
6PCR|1|I|U|2132
6PCR|1|I|G|2133
6PCR|1|I|A|2134
6PCR|1|I|A|2135
6PCR|1|I|G|2136
6PCR|1|I|U|2137
6PCR|1|I|G|2138
6PCR|1|I|U|2139
6PCR|1|I|G|2140
6PCR|1|I|G|2141
6PCR|1|I|A|2142
6PCR|1|I|C|2143
6PCR|1|I|G|2144
6PCR|1|I|C|2145
6PCR|1|I|C|2146
6PCR|1|I|A|2147
6PCR|1|I|G|2148
6PCR|1|I|U|2149
6PCR|1|I|C|2150
6PCR|1|I|U|2151
6PCR|1|I|G|2152
6PCR|1|I|C|2153
6PCR|1|I|A|2154
6PCR|1|I|U|2155
6PCR|1|I|G|2156
6PCR|1|I|G|2157
6PCR|1|I|A|2158
6PCR|1|I|G|2159
6PCR|1|I|C|2160
6PCR|1|I|C|2161
6PCR|1|I|G|2162
6PCR|1|I|A|2163
6PCR|1|I|C|2164
6PCR|1|I|C|2165
6PCR|1|I|U|2166
6PCR|1|I|U|2167
6PCR|1|I|G|2168
6PCR|1|I|A|2169
6PCR|1|I|A|2170
6PCR|1|I|A|2171
6PCR|1|I|U|2172
6PCR|1|I|A|2173
6PCR|1|I|C|2174
6PCR|1|I|C|2175
6PCR|1|I|A|2176
6PCR|1|I|C|2177

Current chains

Chain I: 23S ribosomal RNA

Nearby chains

No other chains within 10Å

HL_6PCR_050