HL_6PPF_006

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAACUGAAACAUCUAAGUAC

Length

21 nucleotides

Bulged bases

6PPF|1|A|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|A|G|191
6PPF|1|A|G|192
6PPF|1|A|A|193
6PPF|1|A|A|194
6PPF|1|A|C|195
6PPF|1|A|U|196
6PPF|1|A|G|197
6PPF|1|A|A|198
6PPF|1|A|A|199
6PPF|1|A|A|200
6PPF|1|A|C|201
6PPF|1|A|A|202
6PPF|1|A|U|203
6PPF|1|A|C|204
6PPF|1|A|U|205
6PPF|1|A|A|206
6PPF|1|A|A|207
6PPF|1|A|G|208
6PPF|1|A|U|209
6PPF|1|A|A|210
6PPF|1|A|C|211

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15