HL_6PPF_052

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UCCUAAAAGGUAACGGA

Length

17 nucleotides

Bulged bases

6PPF|1|A|A|2296, 6PPF|1|A|A|2297, 6PPF|1|A|A|2298, 6PPF|1|A|C|2304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|A|U|2291
6PPF|1|A|C|2292
6PPF|1|A|C|2293
6PPF|1|A|U|2294
6PPF|1|A|A|2295
6PPF|1|A|A|2296
6PPF|1|A|A|2297
6PPF|1|A|A|2298
6PPF|1|A|G|2299
6PPF|1|A|G|2300
6PPF|1|A|U|2301
6PPF|1|A|A|2302
6PPF|1|A|A|2303
6PPF|1|A|C|2304
6PPF|1|A|G|2305
6PPF|1|A|G|2306
6PPF|1|A|A|2307

Current chains

Chain A

23S rRNA

Nearby chains

Chain V

50S ribosomal protein L27