HL_6PPF_067

3D structure

PDB id

6PPF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 45SRbgA ribosomal particle class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUUUUGUAGAAUG

Length

14 nucleotides

Bulged bases

6PPF|1|A|A|618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PPF|1|A|C|608
6PPF|1|A|C|609
6PPF|1|A|U|610
6PPF|1|A|U|611
6PPF|1|A|U|612
6PPF|1|A|U|613
6PPF|1|A|G|614
6PPF|1|A|U|615
6PPF|1|A|A|616
6PPF|1|A|G|617
6PPF|1|A|A|618
6PPF|1|A|A|619
6PPF|1|A|U|620
6PPF|1|A|G|621

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21

Chain b

50S ribosomal protein L32