3D structure

PDB id
6PRV (explore in PDB, NAKB, or RNA 3D Hub)
Description
58nt RNA L11-binding domain from E. coli 23S rRNA
Experimental method
X-RAY DIFFRACTION
Resolution
2.71 Å

Loop

Sequence
CGUAAUAG
Length
8 nucleotides
Bulged bases (A, C, G, U)
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84085.3
Basepair signature
cWW-tSH-F-F-F-F
Number of instances in this motif group
17

Unit IDs

6PRV|1|A|C|1092
6PRV|1|A|G|1093
6PRV|1|A|U|1094
6PRV|1|A|A|1095
6PRV|1|A|A|1096
6PRV|1|A|U|1097
6PRV|1|A|A|1098
6PRV|1|A|G|1099

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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