HL_6Q9A_025
3D structure
- PDB id
- 6Q9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUCAACCCGAC
- Length
- 11 nucleotides
- Bulged bases
- 6Q9A|1|1|C|890
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q9A|1|1|G|883
6Q9A|1|1|U|884
6Q9A|1|1|C|885
6Q9A|1|1|A|886
6Q9A|1|1|A|887
6Q9A|1|1|C|888
6Q9A|1|1|C|889
6Q9A|1|1|C|890
6Q9A|1|1|G|891
6Q9A|1|1|A|892
6Q9A|1|1|C|893
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain r
- 30S ribosomal protein S13
- Chain x
- 30S ribosomal protein S19
Coloring options: