HL_6Q9A_051

3D structure

PDB id

6Q9A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound past E site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGGACGCCAGUCUG

Length

14 nucleotides

Bulged bases

6Q9A|1|1|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q9A|1|1|U|2139
6Q9A|1|1|G|2140
6Q9A|1|1|G|2141
6Q9A|1|1|A|2142
6Q9A|1|1|C|2143
6Q9A|1|1|G|2144
6Q9A|1|1|C|2145
6Q9A|1|1|C|2146
6Q9A|1|1|A|2147
6Q9A|1|1|G|2148
6Q9A|1|1|U|2149
6Q9A|1|1|C|2150
6Q9A|1|1|U|2151
6Q9A|1|1|G|2152

Current chains

Chain 1

23S ribosomal RNA

Nearby chains