HL_6QIK_012

3D structure

PDB id

6QIK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUGCCUCGGUAA

Length

12 nucleotides

Bulged bases

6QIK|1|A|U|545, 6QIK|1|A|C|546

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QIK|1|A|U|540
6QIK|1|A|U|541
6QIK|1|A|G|542
6QIK|1|A|C|543
6QIK|1|A|C|544
6QIK|1|A|U|545
6QIK|1|A|C|546
6QIK|1|A|G|547
6QIK|1|A|G|548
6QIK|1|A|U|549
6QIK|1|A|A|550
6QIK|1|A|A|551

Current chains

Chain A

25S ribosomal RNA

Nearby chains