HL_6QIK_052

3D structure

PDB id

6QIK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QIK_052 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.1997

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6QIK|1|A|C|2470
6QIK|1|A|U|2471
6QIK|1|A|U|2472
6QIK|1|A|C|2473
6QIK|1|A|G|2474
6QIK|1|A|G|2475

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain p

uL1