HL_6QIK_078

3D structure

PDB id

6QIK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CACCUUUG

Length

8 nucleotides

Bulged bases

6QIK|1|A|C|1762

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QIK|1|A|C|1759
6QIK|1|A|A|1760
6QIK|1|A|C|1761
6QIK|1|A|C|1762
6QIK|1|A|U|1763
6QIK|1|A|U|1764
6QIK|1|A|U|1765
6QIK|1|A|G|1766

Current chains

Chain A

25S ribosomal RNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain V

60S ribosomal protein L22-A