HL_6QNQ_019

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNQ_019 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.123

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6QNQ|1|13|C|862
6QNQ|1|13|U|863
6QNQ|1|13|A|864
6QNQ|1|13|A|865
6QNQ|1|13|C|866
6QNQ|1|13|G|867

Current chains

Chain 13

16S ribosomal RNA

Nearby chains

Chain 4E

30S ribosomal protein S5

Chain 7E

30S ribosomal protein S8