HL_6QNQ_033
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGGUAGCGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNQ_033 not in the Motif Atlas
- Homologous match to HL_7RQB_002
- Geometric discrepancy: 0.148
- The information below is about HL_7RQB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_96598.1
- Basepair signature
- cWW
- Number of instances in this motif group
- 15
Unit IDs
6QNQ|1|14|C|87
6QNQ|1|14|G|88
6QNQ|1|14|G|89
6QNQ|1|14|U|90
6QNQ|1|14|A|91
6QNQ|1|14|G|92
6QNQ|1|14|C|93
6QNQ|1|14|G|94
6QNQ|1|14|G|95
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain B5
- 50S ribosomal protein L23
- Chain C5
- 50S ribosomal protein L24
- Chain G5
- 50S ribosomal protein L29
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