HL_6QNQ_064
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUGAGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNQ_064 not in the Motif Atlas
- Homologous match to HL_4WF9_032
- Geometric discrepancy: 0.1063
- The information below is about HL_4WF9_032
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6QNQ|1|14|G|1281
6QNQ|1|14|U|1282
6QNQ|1|14|G|1283
6QNQ|1|14|A|1284
6QNQ|1|14|G|1285
6QNQ|1|14|A|1286
6QNQ|1|14|A|1287
6QNQ|1|14|U|1288
6QNQ|1|14|C|1289
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 55
- 50S ribosomal protein L17
- Chain A5
- 50S ribosomal protein L22
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