HL_6QNQ_068

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAUGGACG

Length

8 nucleotides

Bulged bases

6QNQ|1|14|U|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNQ_068 not in the Motif Atlas

Geometric match to HL_7RQB_037

Geometric discrepancy: 0.1336

The information below is about HL_7RQB_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32426.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

6QNQ|1|14|C|1451
6QNQ|1|14|A|1453
6QNQ|1|14|U|1454
6QNQ|1|14|G|1455
6QNQ|1|14|G|1456
6QNQ|1|14|A|1457
6QNQ|1|14|C|1458
6QNQ|1|14|G|1459

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 55

50S ribosomal protein L17